STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS67449.1Hypothetical protein. (873 aa)    
Predicted Functional Partners:
SIS67462.1
Hypothetical protein.
       0.773
SIS47556.1
Polysaccharide export outer membrane protein.
 
  
  0.591
SIS47361.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
    
  0.537
SIS47925.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
  0.524
SIT08915.1
UDP-N-Acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
  0.486
SIT04200.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    
  0.485
SIS44807.1
Serine O-acetyltransferase.
    
  0.469
SIS47565.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
    
 0.465
SIS47574.1
exopolysaccharide/PEP-CTERM locus tyrosine autokinase.
    
 0.465
SIS73808.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
 0.465
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.