STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS67975.1Sorbitol ABC transporter membrane protein. (314 aa)    
Predicted Functional Partners:
SIS67960.1
Sorbitol ABC transporter membrane protein.
 0.993
SIS67947.1
Sorbitol ABC transporter ATP-binding protein.
 
 0.986
SIS67986.1
Sorbitol-binding protein /mannitol-binding protein.
 0.984
SIS97791.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.961
SIS66830.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.952
SIS97833.1
Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.913
SIS66864.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.910
SIS66878.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family.
 
 0.895
SIS67932.1
Mannitol 2-dehydrogenase.
 
    0.870
SIS97820.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.848
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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