Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS60899.1 | SIS66625.1 | SAMN05421760_102439 | SAMN05421760_10374 | tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | Putative endonuclease. | 0.635 |
SIS60899.1 | rsmI | SAMN05421760_102439 | SAMN05421760_11454 | tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.707 |
SIS66595.1 | SIS66613.1 | SAMN05421760_10372 | SAMN05421760_10373 | Amino acid ABC transporter substrate-binding protein, PAAT family. | HAMP domain-containing protein. | 0.960 |
SIS66595.1 | SIS66625.1 | SAMN05421760_10372 | SAMN05421760_10374 | Amino acid ABC transporter substrate-binding protein, PAAT family. | Putative endonuclease. | 0.486 |
SIS66613.1 | SIS66595.1 | SAMN05421760_10373 | SAMN05421760_10372 | HAMP domain-containing protein. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.960 |
SIS66613.1 | SIS66625.1 | SAMN05421760_10373 | SAMN05421760_10374 | HAMP domain-containing protein. | Putative endonuclease. | 0.486 |
SIS66625.1 | SIS60899.1 | SAMN05421760_10374 | SAMN05421760_102439 | Putative endonuclease. | tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.635 |
SIS66625.1 | SIS66595.1 | SAMN05421760_10374 | SAMN05421760_10372 | Putative endonuclease. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.486 |
SIS66625.1 | SIS66613.1 | SAMN05421760_10374 | SAMN05421760_10373 | Putative endonuclease. | HAMP domain-containing protein. | 0.486 |
SIS66625.1 | SIS66639.1 | SAMN05421760_10374 | SAMN05421760_10375 | Putative endonuclease. | Sodium/proton antiporter, NhaD family. | 0.534 |
SIS66625.1 | rsmI | SAMN05421760_10374 | SAMN05421760_11454 | Putative endonuclease. | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.585 |
SIS66639.1 | SIS66625.1 | SAMN05421760_10375 | SAMN05421760_10374 | Sodium/proton antiporter, NhaD family. | Putative endonuclease. | 0.534 |
rsmI | SIS60899.1 | SAMN05421760_11454 | SAMN05421760_102439 | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.707 |
rsmI | SIS66625.1 | SAMN05421760_11454 | SAMN05421760_10374 | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Putative endonuclease. | 0.585 |