STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS74377.1NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. (246 aa)    
Predicted Functional Partners:
SIS47246.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
   
  0.960
SIS80210.1
ATP-binding cassette, subfamily C, LapB.
   
  0.960
SIS74363.1
Transcriptional regulator, MarR family.
 
     0.907
SIS72803.1
Putative hemin transport protein.
 
    0.675
SIS74393.1
Protein of unknown function.
       0.628
SIS79292.1
Hypothetical protein.
   
    0.603
SIS41685.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
      0.525
SIS41161.1
PQQ-dependent catabolism-associated beta-propeller protein.
   
  
 0.520
SIS74350.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.508
SIS45494.1
Anthranilate synthase component 1.
  
  
 0.475
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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