STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS75424.1Glyoxylase, beta-lactamase superfamily II. (320 aa)    
Predicted Functional Partners:
SIS75403.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
    0.948
SIS75390.1
Type III secretion system YscX (type_III_YscX).
 
     0.864
thiI
[ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
  0.749
SIS74505.1
DNA-binding transcriptional regulator, MarR family.
  
     0.564
SIS86508.1
CDP-4-dehydro-6-deoxyglucose reductase.
     
 0.563
SIS75375.1
Maleylacetoacetate isomerase/maleylpyruvate isomerase.
 
 
   0.553
SIS55454.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.548
SIS75415.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.459
SIT00431.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
  
 0.452
SIS41295.1
DNA-binding transcriptional regulator, CsgD family.
   
   0.447
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.