STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS80210.1ATP-binding cassette, subfamily C, LapB. (706 aa)    
Predicted Functional Partners:
SIS80224.1
Membrane fusion protein, adhesin transport system.
 0.997
SIS93063.1
Membrane fusion protein, protease secretion system.
 0.980
SIS74377.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
  0.960
SIS80249.1
Outer membrane protein, adhesin transport system.
 
 
 0.941
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.900
SIS80195.1
Hypothetical protein.
 
     0.890
SIS80237.1
Regulatory protein, luxR family.
 
    0.834
SIS61874.1
Predicted transglutaminase-like cysteine proteinase.
 
  
 0.826
SIS59934.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
 
  
 0.775
SIS44289.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.748
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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