STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS79160.1ABC-2 type transport system permease protein. (373 aa)    
Predicted Functional Partners:
SIS79146.1
ABC-2 type transport system ATP-binding protein.
 
 0.996
SIS79133.1
HlyD family secretion protein.
  
 0.961
SIS41153.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.937
SIS42732.1
Cu-processing system ATP-binding protein.
 
 
 0.933
SIS81611.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.893
SIT02910.1
Lipopolysaccharide export system ATP-binding protein.
   
 0.889
SIS82394.1
HlyD family secretion protein.
 
  
 0.777
SIS41848.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.735
SIS82408.1
Ribosome-dependent ATPase.
 
 
0.717
SIS97833.1
Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.684
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.