STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS81438.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
SIS81427.1
Transferase 2, rSAM/selenodomain-associated.
     0.995
SIS81398.1
Radical SAM/Cys-rich domain-containing protein.
 
     0.872
SIS81413.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.821
SIS65716.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.613
SIT05059.1
Uncharacterized conserved protein, DUF1499 family.
 
     0.589
SIS82739.1
Selenophosphate synthase.
 
    0.516
SIS97268.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
 
     0.503
SIS97255.1
Na+/proline symporter.
 
     0.488
SIT08959.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
   
   0.478
SIS81454.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
       0.413
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.