Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIS40682.1 | SIS56329.1 | SAMN05421760_101144 | SAMN05421760_102182 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.712 |
| SIS40682.1 | SIS66748.1 | SAMN05421760_101144 | SAMN05421760_10382 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.589 |
| SIS40682.1 | SIS67585.1 | SAMN05421760_101144 | SAMN05421760_103141 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.589 |
| SIS40682.1 | pepQ | SAMN05421760_101144 | SAMN05421760_10545 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Xaa-Pro dipeptidase Metallo peptidase. MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.515 |
| SIS56329.1 | SIS40682.1 | SAMN05421760_102182 | SAMN05421760_101144 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.712 |
| SIS56329.1 | SIS66748.1 | SAMN05421760_102182 | SAMN05421760_10382 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.989 |
| SIS56329.1 | SIS67585.1 | SAMN05421760_102182 | SAMN05421760_103141 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.989 |
| SIS56329.1 | pepQ | SAMN05421760_102182 | SAMN05421760_10545 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Xaa-Pro dipeptidase Metallo peptidase. MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.678 |
| SIS66748.1 | SIS40682.1 | SAMN05421760_10382 | SAMN05421760_101144 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.589 |
| SIS66748.1 | SIS56329.1 | SAMN05421760_10382 | SAMN05421760_102182 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.989 |
| SIS66748.1 | SIS67585.1 | SAMN05421760_10382 | SAMN05421760_103141 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.975 |
| SIS66748.1 | pepQ | SAMN05421760_10382 | SAMN05421760_10545 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Xaa-Pro dipeptidase Metallo peptidase. MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.622 |
| SIS67585.1 | SIS40682.1 | SAMN05421760_103141 | SAMN05421760_101144 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.589 |
| SIS67585.1 | SIS56329.1 | SAMN05421760_103141 | SAMN05421760_102182 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.989 |
| SIS67585.1 | SIS66748.1 | SAMN05421760_103141 | SAMN05421760_10382 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.975 |
| SIS67585.1 | pepQ | SAMN05421760_103141 | SAMN05421760_10545 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Xaa-Pro dipeptidase Metallo peptidase. MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.622 |
| SIS79446.1 | SIS79458.1 | SAMN05421760_10541 | SAMN05421760_10542 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.965 |
| SIS79446.1 | SIS79469.1 | SAMN05421760_10541 | SAMN05421760_10543 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Murein tripeptide amidase MpaA. | 0.509 |
| SIS79446.1 | SIS79482.1 | SAMN05421760_10541 | SAMN05421760_10544 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.514 |
| SIS79446.1 | pepQ | SAMN05421760_10541 | SAMN05421760_10545 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Xaa-Pro dipeptidase Metallo peptidase. MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.558 |
page 1 of 3