Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIS43894.1 | SIS46951.1 | SAMN05421760_101553 | SAMN05421760_101938 | PilZ domain-containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Flagellar FliJ protein. | 0.464 |
| SIS43894.1 | SIS79816.1 | SAMN05421760_101553 | SAMN05421760_10571 | PilZ domain-containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Hypothetical protein. | 0.617 |
| SIS43894.1 | SIS92789.1 | SAMN05421760_101553 | SAMN05421760_1084 | PilZ domain-containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | ABC-type uncharacterized transport system, substrate-binding protein. | 0.479 |
| SIS43894.1 | SIT06981.1 | SAMN05421760_101553 | SAMN05421760_11340 | PilZ domain-containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | HDOD domain-containing protein. | 0.582 |
| SIS46951.1 | SIS43894.1 | SAMN05421760_101938 | SAMN05421760_101553 | Flagellar FliJ protein. | PilZ domain-containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.464 |
| SIS46951.1 | SIS58271.1 | SAMN05421760_101938 | SAMN05421760_102278 | Flagellar FliJ protein. | Protein of unknown function. | 0.464 |
| SIS46951.1 | SIS79816.1 | SAMN05421760_101938 | SAMN05421760_10571 | Flagellar FliJ protein. | Hypothetical protein. | 0.618 |
| SIS46951.1 | SIT06981.1 | SAMN05421760_101938 | SAMN05421760_11340 | Flagellar FliJ protein. | HDOD domain-containing protein. | 0.707 |
| SIS46951.1 | SIT10086.1 | SAMN05421760_101938 | SAMN05421760_11511 | Flagellar FliJ protein. | DedD protein. | 0.500 |
| SIS46951.1 | SIT10169.1 | SAMN05421760_101938 | SAMN05421760_11518 | Flagellar FliJ protein. | Pilus assembly protein FimV. | 0.638 |
| SIS56639.1 | SIS76006.1 | SAMN05421760_102196 | SAMN05421760_104242 | Protein of unknown function. | Protein of unknown function. | 0.578 |
| SIS56639.1 | SIS79816.1 | SAMN05421760_102196 | SAMN05421760_10571 | Protein of unknown function. | Hypothetical protein. | 0.653 |
| SIS56639.1 | SIS91231.1 | SAMN05421760_102196 | SAMN05421760_107127 | Protein of unknown function. | MJ0042 family finger-like domain-containing protein. | 0.612 |
| SIS56639.1 | SIS92789.1 | SAMN05421760_102196 | SAMN05421760_1084 | Protein of unknown function. | ABC-type uncharacterized transport system, substrate-binding protein. | 0.491 |
| SIS56639.1 | SIT10169.1 | SAMN05421760_102196 | SAMN05421760_11518 | Protein of unknown function. | Pilus assembly protein FimV. | 0.613 |
| SIS58271.1 | SIS46951.1 | SAMN05421760_102278 | SAMN05421760_101938 | Protein of unknown function. | Flagellar FliJ protein. | 0.464 |
| SIS58271.1 | SIS76006.1 | SAMN05421760_102278 | SAMN05421760_104242 | Protein of unknown function. | Protein of unknown function. | 0.715 |
| SIS58271.1 | SIS79816.1 | SAMN05421760_102278 | SAMN05421760_10571 | Protein of unknown function. | Hypothetical protein. | 0.674 |
| SIS58271.1 | SIT06981.1 | SAMN05421760_102278 | SAMN05421760_11340 | Protein of unknown function. | HDOD domain-containing protein. | 0.636 |
| SIS58271.1 | SIT10086.1 | SAMN05421760_102278 | SAMN05421760_11511 | Protein of unknown function. | DedD protein. | 0.520 |
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