Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS45430.1 | SIS69562.1 | SAMN05421760_101740 | SAMN05421760_103279 | Putative zinc-or iron-chelating domain-containing protein. | Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX. | 0.545 |
SIS45430.1 | SIS90475.1 | SAMN05421760_101740 | SAMN05421760_10779 | Putative zinc-or iron-chelating domain-containing protein. | Leucine rich repeat-containing protein. | 0.446 |
SIS69562.1 | SIS45430.1 | SAMN05421760_103279 | SAMN05421760_101740 | Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX. | Putative zinc-or iron-chelating domain-containing protein. | 0.545 |
SIS69562.1 | SIS90475.1 | SAMN05421760_103279 | SAMN05421760_10779 | Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX. | Leucine rich repeat-containing protein. | 0.438 |
SIS74422.1 | SIS90475.1 | SAMN05421760_104111 | SAMN05421760_10779 | Hypothetical protein. | Leucine rich repeat-containing protein. | 0.405 |
SIS74422.1 | SIT01886.1 | SAMN05421760_104111 | SAMN05421760_11139 | Hypothetical protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.546 |
SIS90463.1 | SIS90475.1 | SAMN05421760_10778 | SAMN05421760_10779 | Fe-S-cluster containining protein. | Leucine rich repeat-containing protein. | 0.467 |
SIS90475.1 | SIS45430.1 | SAMN05421760_10779 | SAMN05421760_101740 | Leucine rich repeat-containing protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.446 |
SIS90475.1 | SIS69562.1 | SAMN05421760_10779 | SAMN05421760_103279 | Leucine rich repeat-containing protein. | Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX. | 0.438 |
SIS90475.1 | SIS74422.1 | SAMN05421760_10779 | SAMN05421760_104111 | Leucine rich repeat-containing protein. | Hypothetical protein. | 0.405 |
SIS90475.1 | SIS90463.1 | SAMN05421760_10779 | SAMN05421760_10778 | Leucine rich repeat-containing protein. | Fe-S-cluster containining protein. | 0.467 |
SIS90475.1 | SIT01886.1 | SAMN05421760_10779 | SAMN05421760_11139 | Leucine rich repeat-containing protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.422 |
SIS90475.1 | SIT07790.1 | SAMN05421760_10779 | SAMN05421760_113106 | Leucine rich repeat-containing protein. | Predicted transcriptional regulator. | 0.501 |
SIS90475.1 | birA | SAMN05421760_10779 | SAMN05421760_106108 | Leucine rich repeat-containing protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.506 |
SIS90475.1 | purL | SAMN05421760_10779 | SAMN05421760_1011104 | Leucine rich repeat-containing protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.511 |
SIT01886.1 | SIS74422.1 | SAMN05421760_11139 | SAMN05421760_104111 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Hypothetical protein. | 0.546 |
SIT01886.1 | SIS90475.1 | SAMN05421760_11139 | SAMN05421760_10779 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Leucine rich repeat-containing protein. | 0.422 |
SIT07790.1 | SIS90475.1 | SAMN05421760_113106 | SAMN05421760_10779 | Predicted transcriptional regulator. | Leucine rich repeat-containing protein. | 0.501 |
birA | SIS90475.1 | SAMN05421760_106108 | SAMN05421760_10779 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Leucine rich repeat-containing protein. | 0.506 |
purL | SIS90475.1 | SAMN05421760_1011104 | SAMN05421760_10779 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Leucine rich repeat-containing protein. | 0.511 |