STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS93036.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
SIS93063.1
Membrane fusion protein, protease secretion system.
 
  
 0.874
SIS93050.1
ATP-binding cassette, subfamily C, exporter for protease/lipase.
 
 
 0.858
SIT00518.1
Iron complex outermembrane recepter protein.
    
 
 0.728
SIT04502.1
Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.728
SIS59934.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
 0.706
SIS80210.1
ATP-binding cassette, subfamily C, LapB.
 
  
 0.700
SIS93076.1
Outer membrane protein/outer membrane protein, protease secretion system.
  
  
 0.693
SIS80224.1
Membrane fusion protein, adhesin transport system.
 
  
 0.691
SIS46027.1
VCBS repeat-containing protein.
 
 0.665
SIS46980.1
Flagellar motor switch protein FliN/FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.542
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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