STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS96989.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
SIS97003.1
Hypothetical protein.
 
    0.935
SIS97029.1
Phosphonate transport system substrate-binding protein.
 
     0.919
SIS39859.1
Signal recognition particle receptor subunit beta, a GTPase.
 
     0.783
SIT02712.1
Signal recognition particle receptor subunit beta, a GTPase.
 
     0.777
SIS97016.1
Aerotaxis receptor.
 
     0.759
SIT12241.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.724
SIS96975.1
Hypothetical protein.
       0.692
SIS96963.1
Hypothetical protein.
       0.645
SIS60299.1
Uncharacterized protein YPO0396.
  
     0.608
SIS47112.1
Hook-length control protein FliK.
  
     0.597
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.