STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT00367.1Phospholipid-binding lipoprotein MlaA. (242 aa)    
Predicted Functional Partners:
SIT00358.1
Outer membrane protein (porin).
   
 
 0.915
SIS61662.1
Outer membrane protein (porin).
    
 
 0.848
SIS75548.1
Outer membrane protein (porin).
    
 
 0.848
SIT03003.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
   
 0.816
SIT03016.1
Phospholipid transport system substrate-binding protein.
 
 
 
 0.809
SIS95031.1
Protein of unknown function.
    
 
 0.772
SIT00379.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
       0.737
SIT00393.1
Anti-anti-sigma factor.
       0.737
SIT05713.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
     
 0.586
SIT02991.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
   
 0.509
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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