STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT04169.13-hydroxyacyl-CoA dehydrogenase. (503 aa)    
Predicted Functional Partners:
SIT04142.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
SIT04155.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 0.998
SIT04189.1
acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.991
SIT10845.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.991
SIS74977.1
Enoyl-CoA hydratase/carnithine racemase.
 0.989
SIT04402.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.986
SIT04180.1
acyl-CoA thioesterase.
  
 0.974
SIS79602.1
enoyl-CoA hydratase.
 0.967
SIS94332.1
Enoyl-CoA hydratase.
 0.965
SIT11404.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.956
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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