STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT07694.1Diguanylate cyclase (GGDEF) domain-containing protein. (375 aa)    
Predicted Functional Partners:
SIS68320.1
HD domain-containing protein.
 
  0.959
SIT05562.1
Putative two-component system response regulator.
 
 
  0.947
SIS44270.1
Two component transcriptional regulator, LuxR family.
 
 
 
  0.906
SIS75025.1
PAS domain S-box-containing protein.
 0.887
SIS75012.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.857
SIS99779.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.846
SIS90310.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.834
SIS92777.1
Two-component system, NarL family, sensor histidine kinase BarA.
 0.828
SIS99326.1
Hpt sensor hybrid histidine kinase.
 0.820
SIS42446.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.813
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.