Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX53690.1Hypothetical protein. (722 aa)    
Predicted Functional Partners:
EEX53692.1
Hypothetical protein.
       0.794
EEX53691.1
Phage tail tape measure protein, TP901 family.
       0.785
EEX53693.1
Hypothetical protein.
       0.522
EEX53689.1
Hypothetical protein.
       0.518
EEX53688.1
Hypothetical protein.
       0.492
EEX53694.1
Hypothetical protein.
       0.429
EEX53687.1
Hypothetical protein.
       0.410
Your Current Organism:
Prevotella sp. F0295
NCBI taxonomy Id: 619693
Other names: P. sp. oral taxon 472 str. F0295, Prevotella sp. oral taxon 472 str. F0295
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