Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX52262.1 | EEX52264.1 | HMPREF6745_2254 | HMPREF6745_2256 | Hypothetical protein; 1.1.1.23. | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | 0.846 |
EEX52262.1 | EEX52265.1 | HMPREF6745_2254 | HMPREF6745_2257 | Hypothetical protein; 1.1.1.23. | Hypothetical protein. | 0.846 |
EEX52262.1 | EEX52266.1 | HMPREF6745_2254 | HMPREF6745_2258 | Hypothetical protein; 1.1.1.23. | MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528. | 0.846 |
EEX52262.1 | eryC | HMPREF6745_2254 | HMPREF6745_2251 | Hypothetical protein; 1.1.1.23. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family. | 0.563 |
EEX52262.1 | rfbB | HMPREF6745_2254 | HMPREF6745_2255 | Hypothetical protein; 1.1.1.23. | dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.857 |
EEX52262.1 | wxcM | HMPREF6745_2254 | HMPREF6745_2253 | Hypothetical protein; 1.1.1.23. | WxcM-like protein; Pfam: PF05523; InterPro: IPR008894. | 0.857 |
EEX52264.1 | EEX52262.1 | HMPREF6745_2256 | HMPREF6745_2254 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | Hypothetical protein; 1.1.1.23. | 0.846 |
EEX52264.1 | EEX52265.1 | HMPREF6745_2256 | HMPREF6745_2257 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | Hypothetical protein. | 0.857 |
EEX52264.1 | EEX52266.1 | HMPREF6745_2256 | HMPREF6745_2258 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528. | 0.858 |
EEX52264.1 | eryC | HMPREF6745_2256 | HMPREF6745_2251 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family. | 0.650 |
EEX52264.1 | rfbB | HMPREF6745_2256 | HMPREF6745_2255 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.846 |
EEX52264.1 | wxcM | HMPREF6745_2256 | HMPREF6745_2253 | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | WxcM-like protein; Pfam: PF05523; InterPro: IPR008894. | 0.847 |
EEX52265.1 | EEX52262.1 | HMPREF6745_2257 | HMPREF6745_2254 | Hypothetical protein. | Hypothetical protein; 1.1.1.23. | 0.846 |
EEX52265.1 | EEX52264.1 | HMPREF6745_2257 | HMPREF6745_2256 | Hypothetical protein. | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | 0.857 |
EEX52265.1 | EEX52266.1 | HMPREF6745_2257 | HMPREF6745_2258 | Hypothetical protein. | MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528. | 0.879 |
EEX52265.1 | eryC | HMPREF6745_2257 | HMPREF6745_2251 | Hypothetical protein. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family. | 0.648 |
EEX52265.1 | rfbB | HMPREF6745_2257 | HMPREF6745_2255 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.846 |
EEX52265.1 | wxcM | HMPREF6745_2257 | HMPREF6745_2253 | Hypothetical protein. | WxcM-like protein; Pfam: PF05523; InterPro: IPR008894. | 0.846 |
EEX52266.1 | EEX52262.1 | HMPREF6745_2258 | HMPREF6745_2254 | MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528. | Hypothetical protein; 1.1.1.23. | 0.846 |
EEX52266.1 | EEX52264.1 | HMPREF6745_2258 | HMPREF6745_2256 | MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528. | Phosphodiesterase family protein; Pfam: PF00149; InterPro: IPR000979. | 0.858 |
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