STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_10772Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
T265_15369
Uncharacterized protein.
    
 
 0.668
T265_03325
Peptidase S59 domain-containing protein.
      
 0.647
T265_03450
ENTH domain-containing protein.
      
 0.522
T265_06085
Uncharacterized protein.
   
  
 0.516
KATNA1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
  
 0.513
T265_10136
HIT zinc finger.
      
 0.507
T265_11576
Putative nucleoporin GLE2.
      
 0.504
T265_11444
Uncharacterized protein.
    
 
 0.495
T265_05422
Uncharacterized protein.
    
   0.495
T265_16270
Uncharacterized protein.
    
   0.495
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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