STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_10344SET domain protein. (1792 aa)    
Predicted Functional Partners:
T265_10570
Uncharacterized protein.
   
 0.920
T265_00004
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.920
T265_10475
Histone domain-containing protein.
   
 0.919
T265_13221
Histone H3; Belongs to the histone H3 family.
   
 0.919
T265_01084
Histone domain-containing protein.
   
 0.919
T265_01255
Histone domain-containing protein.
   
 0.919
T265_13991
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.906
T265_05699
RPOLD domain-containing protein.
   
 0.901
T265_09750
Histone H2A; Belongs to the histone H2A family.
    
 0.856
T265_09146
Uncharacterized protein.
    
 
 0.851
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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