STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_08112Uncharacterized protein. (87 aa)    
Predicted Functional Partners:
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.974
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.973
T265_03378
Sm domain-containing protein.
   
 0.972
T265_14671
Sm domain-containing protein.
   
 0.970
T265_11668
DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
   
 0.963
T265_04068
Sm domain-containing protein.
   
 
 0.932
T265_07587
Uncharacterized protein.
    
 0.925
T265_07537
mRNA_decap_C domain-containing protein.
    
 0.783
T265_14581
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
    
 0.731
T265_02916
Uncharacterized protein.
    
 0.731
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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