STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_07615BHLH domain-containing protein. (546 aa)    
Predicted Functional Partners:
T265_15005
PAS domain-containing protein.
   
 0.967
T265_09891
PAS_3 domain-containing protein.
    
 0.840
T265_14934
BHLH domain-containing protein.
    
 0.840
T265_07202
Uncharacterized protein.
    
 0.788
T265_09227
Uncharacterized protein.
    
 0.656
T265_03433
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.641
T265_12104
Uncharacterized protein.
   
 0.636
T265_07671
Uncharacterized protein.
   
 0.636
T265_05895
Uncharacterized protein.
   
 0.636
T265_07963
Uncharacterized protein.
    
 
 0.598
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.