Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T265_14854Uncharacterized protein; Belongs to the CD36 family. (243 aa)    
Predicted Functional Partners:
T265_08036
Uncharacterized protein.
    
 0.571
T265_06188
Uncharacterized protein; Belongs to the adaptor complexes medium subunit family.
     
  0.417
T265_13093
AP complex subunit beta.
     
  0.417
T265_10432
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
  0.412
T265_14844
Uncharacterized protein.
     
  0.404
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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