STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_05257Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
T265_09487
ARL2_Bind_BART domain-containing protein.
      
 0.523
T265_13053
TPR_REGION domain-containing protein.
      
 0.519
T265_01216
LsmAD domain protein.
      
 0.516
T265_05253
Uncharacterized protein.
      
 0.508
T265_04367
Tub domain-containing protein; Belongs to the TUB family.
      
 0.497
T265_13089
Uncharacterized protein.
      
 0.450
T265_09798
RING-type domain-containing protein.
      
 0.416
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.