STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_05143Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
T265_09253
Uncharacterized protein.
   
 0.999
T265_14140
Uncharacterized protein.
   
 0.999
T265_01809
UBA domain-containing protein.
   
 0.999
T265_00163
Uncharacterized protein.
   
 0.999
T265_03325
Peptidase S59 domain-containing protein.
    
 0.993
T265_13041
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.993
T265_01615
Nuclear pore protein.
   
 0.992
T265_07599
Uncharacterized protein.
   
 0.985
T265_10110
Uncharacterized protein.
   
 0.981
T265_10735
Uncharacterized protein.
    
 0.980
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.