STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_04766SRP54 domain-containing protein. (803 aa)    
Predicted Functional Partners:
T265_00469
Uncharacterized protein.
   
 0.998
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
0.997
T265_13044
SRP72 domain-containing protein.
   
 0.964
T265_03194
Uncharacterized protein.
   
 0.961
T265_03714
Ribosomal_L23eN domain-containing protein.
  
 
 0.959
T265_13051
Ribosomal_L18_c domain-containing protein.
   
 
 0.942
T265_08876
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.900
T265_02901
Ribosomal_L18e/L15P domain-containing protein.
  
 
 0.887
T265_02543
Uncharacterized protein.
  
 
 0.887
T265_11726
Uncharacterized protein.
   
 
 0.884
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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