STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_13782Uncharacterized protein; Belongs to the DEAD box helicase family. (455 aa)    
Predicted Functional Partners:
T265_06361
MIF4G domain-containing protein.
   
 0.993
T265_00778
W2 domain-containing protein.
   
 0.993
T265_04631
Uncharacterized protein.
   
 
 0.955
T265_15598
Uncharacterized protein.
   
 
 0.952
T265_05147
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.951
T265_01587
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.941
T265_10029
Uncharacterized protein.
   
 0.932
T265_00425
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.916
T265_01214
W2 domain-containing protein.
   
 0.905
T265_12086
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 
0.902
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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