STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_07251Reticulon-like protein. (193 aa)    
Predicted Functional Partners:
T265_11610
SEC63 domain-containing protein.
    
 
 0.725
T265_05658
Receptor expression-enhancing protein.
    
 
 0.722
T265_09383
Uncharacterized protein.
    
   0.629
T265_03352
Uncharacterized protein.
   
 
 0.561
T265_05838
Zinc_ribbon_10 domain-containing protein.
    
 
 0.558
T265_08108
Uncharacterized protein.
     
 0.530
T265_02495
GTP_cyclohydroI domain-containing protein.
    
   0.520
T265_02493
GTP_cyclohydroI domain-containing protein.
    
   0.520
T265_08274
MSP domain-containing protein.
   
 
 0.512
T265_03493
Receptor expression-enhancing protein.
   
 
 0.510
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.