STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_13913G-patch domain-containing protein. (1644 aa)    
Predicted Functional Partners:
T265_12857
Uncharacterized protein.
   
 0.994
T265_02973
Uncharacterized protein.
   
 
 0.942
T265_06433
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.925
T265_06824
KH domain-containing protein.
   
 0.715
T265_09022
Uncharacterized protein.
    
 0.707
T265_08601
Uncharacterized protein.
   
 
 0.705
T265_15216
Cwf21 domain-containing protein.
   
 
 0.656
T265_06836
Uncharacterized protein.
   
  0.655
T265_14079
Uncharacterized protein.
   
 
  0.624
T265_06520
C3H1-type domain-containing protein.
   
 0.570
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.