STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_04684Dynein light chain. (111 aa)    
Predicted Functional Partners:
T265_15099
WD_REPEATS_REGION domain-containing protein.
    
 0.556
T265_03205
WD_REPEATS_REGION domain-containing protein.
    
 0.556
T265_14035
WD_REPEATS_REGION domain-containing protein.
    
 0.556
T265_04041
Uncharacterized protein.
    
 0.553
T265_14995
Robl_LC7 domain-containing protein.
   
 0.551
T265_06970
Robl_LC7 domain-containing protein.
   
 0.551
T265_12490
Uncharacterized protein.
    
 0.550
T265_00392
Uncharacterized protein.
    
 0.548
T265_09776
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family.
    
 0.537
T265_09040
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.516
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.