STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_00372BTB_2 domain-containing protein. (404 aa)    
Predicted Functional Partners:
T265_03714
Ribosomal_L23eN domain-containing protein.
   
 0.767
T265_07192
Ribosomal protein L31e.
   
 0.762
T265_11726
Uncharacterized protein.
   
 0.755
T265_05776
TRASH domain-containing protein.
   
 0.751
T265_03045
Ribosomal_L7Ae domain-containing protein.
   
 0.751
T265_04167
Ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.748
T265_13051
Ribosomal_L18_c domain-containing protein.
  
 0.724
T265_00813
Uncharacterized protein.
   
 0.723
T265_09510
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.722
T265_05694
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.721
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.