STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_05490Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
T265_02549
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.923
T265_13198
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
0.774
T265_01675
Uncharacterized protein.
   
0.708
T265_04166
Reverse transcriptase domain-containing protein.
   
 
 0.671
T265_09088
Uncharacterized protein.
   
 
 0.629
T265_00717
Uncharacterized protein.
   
 
 0.629
T265_08615
Sec16_C domain-containing protein.
   
 
 0.595
T265_11610
SEC63 domain-containing protein.
   
 
 0.588
T265_05604
GOLD domain-containing protein.
    
 0.554
T265_13041
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 
 0.551
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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