STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T265_01099Uncharacterized protein. (596 aa)    
Predicted Functional Partners:
T265_14797
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.999
T265_07287
CP-type G domain-containing protein.
   
 
 0.999
T265_06303
Uncharacterized protein.
   
 
 0.999
T265_03943
CBF domain-containing protein.
   
 
 0.999
T265_04726
BOP1NT domain-containing protein.
   
 
 0.999
T265_14014
RRM domain-containing protein.
   
 
 0.998
T265_06003
Uncharacterized protein.
   
 
 0.998
T265_07673
Uncharacterized protein.
   
 
 0.998
T265_02034
Ribosomal protein, L1P family.
   
 
 0.998
T265_03813
Brix domain-containing protein.
   
 
 0.998
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.