Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB58872.1 | SKB60516.1 | SAMN05660477_00072 | SAMN05660477_00175 | DKNYY family protein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.472 |
SKB58872.1 | SKB60554.1 | SAMN05660477_00072 | SAMN05660477_00177 | DKNYY family protein. | Ankyrin repeat. | 0.889 |
SKB58872.1 | SKB64068.1 | SAMN05660477_00072 | SAMN05660477_00431 | DKNYY family protein. | ThiF family protein. | 0.864 |
SKB58872.1 | SKB64078.1 | SAMN05660477_00072 | SAMN05660477_00432 | DKNYY family protein. | Integrative and conjugative element protein, VC0181 family. | 0.864 |
SKB58872.1 | SKB66701.1 | SAMN05660477_00072 | SAMN05660477_00626 | DKNYY family protein. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A). | 0.999 |
SKB58872.1 | SKB81039.1 | SAMN05660477_00072 | SAMN05660477_01241 | DKNYY family protein. | Sulfate permease, MFS superfamily. | 0.446 |
SKB58872.1 | rpsC | SAMN05660477_00072 | SAMN05660477_01942 | DKNYY family protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.548 |
SKB60506.1 | SKB60516.1 | SAMN05660477_00174 | SAMN05660477_00175 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.854 |
SKB60506.1 | SKB60527.1 | SAMN05660477_00174 | SAMN05660477_00176 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Predicted protein. | 0.825 |
SKB60506.1 | SKB60554.1 | SAMN05660477_00174 | SAMN05660477_00177 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Ankyrin repeat. | 0.818 |
SKB60516.1 | SKB58872.1 | SAMN05660477_00175 | SAMN05660477_00072 | Sulfite reductase (NADPH) flavoprotein alpha-component. | DKNYY family protein. | 0.472 |
SKB60516.1 | SKB60506.1 | SAMN05660477_00175 | SAMN05660477_00174 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.854 |
SKB60516.1 | SKB60527.1 | SAMN05660477_00175 | SAMN05660477_00176 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Predicted protein. | 0.958 |
SKB60516.1 | SKB60554.1 | SAMN05660477_00175 | SAMN05660477_00177 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Ankyrin repeat. | 0.983 |
SKB60527.1 | SKB60506.1 | SAMN05660477_00176 | SAMN05660477_00174 | Predicted protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.825 |
SKB60527.1 | SKB60516.1 | SAMN05660477_00176 | SAMN05660477_00175 | Predicted protein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.958 |
SKB60527.1 | SKB60554.1 | SAMN05660477_00176 | SAMN05660477_00177 | Predicted protein. | Ankyrin repeat. | 0.957 |
SKB60554.1 | SKB58872.1 | SAMN05660477_00177 | SAMN05660477_00072 | Ankyrin repeat. | DKNYY family protein. | 0.889 |
SKB60554.1 | SKB60506.1 | SAMN05660477_00177 | SAMN05660477_00174 | Ankyrin repeat. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.818 |
SKB60554.1 | SKB60516.1 | SAMN05660477_00177 | SAMN05660477_00175 | Ankyrin repeat. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.983 |
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