Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB63113.1 | SKB63148.1 | SAMN05660477_00365 | SAMN05660477_00366 | Bacteroides conjugative transposon TraJ protein. | Protein of unknown function. | 0.978 |
SKB63113.1 | SKB63208.1 | SAMN05660477_00365 | SAMN05660477_00367 | Bacteroides conjugative transposon TraJ protein. | Bacteroides conjugation system ATPase, TraG family. | 0.972 |
SKB63113.1 | SKB64776.1 | SAMN05660477_00365 | SAMN05660477_00476 | Bacteroides conjugative transposon TraJ protein. | DNA topoisomerase-3. | 0.500 |
SKB63113.1 | SKB64786.1 | SAMN05660477_00365 | SAMN05660477_00477 | Bacteroides conjugative transposon TraJ protein. | Protein of unknown function. | 0.588 |
SKB63148.1 | SKB63113.1 | SAMN05660477_00366 | SAMN05660477_00365 | Protein of unknown function. | Bacteroides conjugative transposon TraJ protein. | 0.978 |
SKB63148.1 | SKB63208.1 | SAMN05660477_00366 | SAMN05660477_00367 | Protein of unknown function. | Bacteroides conjugation system ATPase, TraG family. | 0.973 |
SKB63148.1 | SKB64776.1 | SAMN05660477_00366 | SAMN05660477_00476 | Protein of unknown function. | DNA topoisomerase-3. | 0.546 |
SKB63148.1 | SKB64786.1 | SAMN05660477_00366 | SAMN05660477_00477 | Protein of unknown function. | Protein of unknown function. | 0.667 |
SKB63208.1 | SKB63113.1 | SAMN05660477_00367 | SAMN05660477_00365 | Bacteroides conjugation system ATPase, TraG family. | Bacteroides conjugative transposon TraJ protein. | 0.972 |
SKB63208.1 | SKB63148.1 | SAMN05660477_00367 | SAMN05660477_00366 | Bacteroides conjugation system ATPase, TraG family. | Protein of unknown function. | 0.973 |
SKB63208.1 | SKB64776.1 | SAMN05660477_00367 | SAMN05660477_00476 | Bacteroides conjugation system ATPase, TraG family. | DNA topoisomerase-3. | 0.470 |
SKB63208.1 | SKB64786.1 | SAMN05660477_00367 | SAMN05660477_00477 | Bacteroides conjugation system ATPase, TraG family. | Protein of unknown function. | 0.607 |
SKB64776.1 | SKB63113.1 | SAMN05660477_00476 | SAMN05660477_00365 | DNA topoisomerase-3. | Bacteroides conjugative transposon TraJ protein. | 0.500 |
SKB64776.1 | SKB63148.1 | SAMN05660477_00476 | SAMN05660477_00366 | DNA topoisomerase-3. | Protein of unknown function. | 0.546 |
SKB64776.1 | SKB63208.1 | SAMN05660477_00476 | SAMN05660477_00367 | DNA topoisomerase-3. | Bacteroides conjugation system ATPase, TraG family. | 0.470 |
SKB64776.1 | SKB64786.1 | SAMN05660477_00476 | SAMN05660477_00477 | DNA topoisomerase-3. | Protein of unknown function. | 0.696 |
SKB64776.1 | polA | SAMN05660477_00476 | SAMN05660477_02818 | DNA topoisomerase-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.703 |
SKB64786.1 | SKB63113.1 | SAMN05660477_00477 | SAMN05660477_00365 | Protein of unknown function. | Bacteroides conjugative transposon TraJ protein. | 0.588 |
SKB64786.1 | SKB63148.1 | SAMN05660477_00477 | SAMN05660477_00366 | Protein of unknown function. | Protein of unknown function. | 0.667 |
SKB64786.1 | SKB63208.1 | SAMN05660477_00477 | SAMN05660477_00367 | Protein of unknown function. | Bacteroides conjugation system ATPase, TraG family. | 0.607 |
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