STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66065.1Gliding motility-associated lipoprotein GldJ. (530 aa)    
Predicted Functional Partners:
SKB70997.1
Gliding motility-associated protein GldL.
 
   
 0.898
SKB71042.1
Gliding motility associated protien GldN.
 
   
 0.897
SKB73340.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.897
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
      0.882
SKB66085.1
Hypothetical protein.
 
     0.872
SKB71006.1
Gliding motility-associated protein GldM.
 
   
 0.867
SKB75751.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.854
SKB97893.1
Cell surface protein SprA.
  
   
 0.848
SKC10252.1
Hypothetical protein.
  
   
 0.848
SKB79227.1
Hypothetical protein.
  
   
 0.840
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.