STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB71858.1Alpha-2-macroglobulin family protein. (1964 aa)    
Predicted Functional Partners:
SKB72608.1
Hypothetical protein.
  
     0.587
SKB71848.1
Hypothetical protein.
       0.557
SKB70454.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
     0.513
SKB92300.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.505
SKC00715.1
CBS domain-containing protein.
  
     0.495
SKB72437.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.491
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
       0.463
SKB60294.1
Hypothetical protein.
  
     0.425
SKC02301.1
Hypothetical protein.
  
     0.420
SKB70562.1
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.406
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.