STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argHArgininosuccinate lyase. (434 aa)    
Predicted Functional Partners:
SKB75038.1
Argininosuccinate synthase.
 
 0.999
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 
 0.989
SKB75078.1
N-succinyl-L-ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 0.984
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.975
SKB79031.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.938
SKB75067.1
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.928
SKB74989.1
Hypothetical protein.
 
 
 0.921
SKC06166.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
   
 0.921
SKB66543.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.914
SKB94971.1
Arginine decarboxylase.
     
 0.913
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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