STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB75742.1Protein N-acetyltransferase, RimJ/RimL family. (178 aa)    
Predicted Functional Partners:
SKC10241.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.772
SKB87122.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.756
SKB79567.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.690
SKB75751.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
       0.580
SKB75733.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.570
SKB90494.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.561
nhaA
Na+:H+ antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
       0.559
SKB75760.1
ABC-2 type transport system permease protein.
       0.535
SKB75716.1
Hypothetical protein.
       0.482
SKB75769.1
Putative membrane protein.
       0.424
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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