STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB78683.1Exosortase F-associated protein. (145 aa)    
Predicted Functional Partners:
SKB78659.1
Exosortase family protein XrtF.
 
     0.957
SKB87290.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.767
SKB83226.1
Polysaccharide biosynthesis/export protein.
  
     0.759
SKB62797.1
Hypothetical protein.
  
     0.741
SKB83858.1
Hypothetical protein.
  
     0.728
SKB59063.1
Hypothetical protein.
  
     0.711
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.706
SKB87411.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.701
SKC09406.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.695
SKB66618.1
Hypothetical protein.
  
     0.685
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.