STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB86601.1Aspartate aminotransferase. (417 aa)    
Predicted Functional Partners:
SKB82019.1
Homoserine dehydrogenase.
  
 0.957
SKC04258.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
 
   
  0.955
SKB74041.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.952
SKB90685.1
Prephenate dehydratase.
   
  0.950
SKB90239.1
Aspartate ammonia-lyase.
     
 0.948
SKC10099.1
Dipeptidase D.
  
 
  0.929
SKC02961.1
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
  0.922
SKC04535.1
Aspartate aminotransferase.
  
  
 
0.921
SKC07863.1
Aspartate aminotransferase.
  
  
 
0.921
SKB75038.1
Argininosuccinate synthase.
   
 0.917
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.