STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB88004.1Protein of unknown function. (212 aa)    
Predicted Functional Partners:
SKB88001.1
Thioredoxin.
       0.773
SKB88010.1
Hypothetical protein.
       0.773
SKB90736.1
Component of the Tol biopolymer transport system.
  
 0.614
SKB82860.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  0.563
SKB87675.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.557
SKB87997.1
Protein of unknown function.
       0.532
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.528
SKC06196.1
Signal transduction histidine kinase.
  
 
 0.473
SKB87991.1
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD.
       0.469
SKB81552.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
   
 0.465
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.