STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB88350.1Superfamily I DNA and/or RNA helicase. (1900 aa)    
Predicted Functional Partners:
SKB74131.1
Hypothetical protein.
  
     0.578
SKB96844.1
Por secretion system C-terminal sorting domain-containing protein.
 
    0.561
SKB65809.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.549
SKB71743.1
Tetratricopeptide repeat.
  
     0.544
SKC01961.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.539
SKC08016.1
Regulatory protein, luxR family.
  
     0.495
SKB96834.1
Tetratricopeptide repeat-containing protein.
  
     0.494
SKC01974.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.486
SKB71908.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.485
SKB96815.1
Tetratricopeptide repeat-containing protein.
  
     0.482
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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