STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB95151.1Histidine kinase. (258 aa)    
Predicted Functional Partners:
SKB95158.1
Two component transcriptional regulator, LuxR family.
 
  
  0.953
SKC06196.1
Signal transduction histidine kinase.
    
 0.952
SKC06191.1
PAS domain S-box-containing protein.
    
  0.904
SKB90744.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  
  0.804
SKB73813.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  
  0.803
SKB86087.1
Two component transcriptional regulator, LuxR family.
 
  
  0.803
SKB73568.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  
  0.802
SKC02268.1
Two component transcriptional regulator, LuxR family.
 
  
  0.802
SKB73583.1
Signal transduction histidine kinase.
     
 0.721
SKB83765.1
Regulatory protein, luxR family.
 
  
  0.669
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.