STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB97046.1Gliding motility-associated C-terminal domain-containing protein. (906 aa)    
Predicted Functional Partners:
SKB87962.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.727
SKC06644.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.713
SKB62362.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.657
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.639
SKB62489.1
Peptidase family S41.
  
   0.624
SKB66065.1
Gliding motility-associated lipoprotein GldJ.
  
     0.619
SKB83295.1
Outer membrane protein beta-barrel domain-containing protein.
  
    0.614
SKB75751.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
     0.572
SKB91418.1
Hypothetical protein.
  
 
  0.550
SKC02047.1
Protein of unknown function.
  
     0.549
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.