STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB97333.1Glycosyltransferase involved in cell wall bisynthesis. (250 aa)    
Predicted Functional Partners:
SKB96026.1
Glycosyl transferase family 2.
  
     0.716
SKB81323.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.698
SKC11072.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
    0.613
SKB97341.1
TQO small subunit DoxA.
       0.598
SKB97365.1
TQO small subunit DoxD.
       0.598
SKB90330.1
Glycosyl transferase family 2.
  
  
  0.538
SKB95966.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.537
SKB97395.1
Hypothetical protein.
       0.491
SKB87707.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase.
 
 
0.484
SKB96008.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.450
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.