STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB98217.1Regulatory protein, luxR family. (559 aa)    
Predicted Functional Partners:
SKC06196.1
Signal transduction histidine kinase.
 
 
 0.904
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.778
SKB99964.1
Regulatory protein, luxR family.
  
     0.748
SKB72919.1
Hypothetical protein.
  
     0.649
SKB98224.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.644
SKB64068.1
ThiF family protein.
   
  0.639
SKB64078.1
Integrative and conjugative element protein, VC0181 family.
   
  0.639
SKC10894.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.637
SKC10889.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.624
SKB80258.1
Molecular chaperone HtpG.
   
  0.621
Your Current Organism:
Soonwooa buanensis
NCBI taxonomy Id: 619805
Other names: CECT 7503, DSM 22323, DSM 26167, Flavobacteriaceae bacterium HM0024, KCTC 22689, S. buanensis, Soonwooa buanensis Joung et al. 2010 emend. Sirra et al. 2017, strain HM0024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.