STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTAC_LOCUS1978Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (247 aa)    
Predicted Functional Partners:
TTAC_LOCUS823
Uncharacterized protein.
   
 0.997
TTAC_LOCUS3272
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.981
TTAC_LOCUS9209
BTB domain-containing protein.
   
 0.981
TTAC_LOCUS7384
Uncharacterized protein.
    
 0.976
TTAC_LOCUS1041
Uncharacterized protein.
    
 0.970
A0A0R3XB44
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
    
 
 0.962
A0A0R3WT57
ERCC4 domain-containing protein.
   
 0.945
TTAC_LOCUS2284
ERCC4 domain-containing protein.
   
 0.941
A0A0R3WWU4
RMI1_N domain-containing protein.
    
 0.931
TTAC_LOCUS2259
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.907
Your Current Organism:
Hydatigera taeniaeformis
NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis
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