STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTAC_LOCUS2670Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
TTAC_LOCUS5034
tRNA (guanine(46)-N(7))-methyltransferase.
   
 0.996
TTAC_LOCUS5698
tRNA (guanine(46)-N(7))-methyltransferase.
   
 0.996
TTAC_LOCUS1909
tRNA pseudouridine synthase.
   
 
 0.950
TTAC_LOCUS8232
Uncharacterized protein.
   
  
 0.936
TTAC_LOCUS1036
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
    0.881
TTAC_LOCUS205
Uncharacterized protein.
   
    0.878
A0A0R3XAC7
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.866
TTAC_LOCUS8455
Uncharacterized protein.
   
  
 0.847
TTAC_LOCUS8848
Peptidase_M24 domain-containing protein.
   
    0.806
TTAC_LOCUS8050
Uncharacterized protein.
   
  
 0.798
Your Current Organism:
Hydatigera taeniaeformis
NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis
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