STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTAC_LOCUS6887N2227 domain-containing protein. (373 aa)    
Predicted Functional Partners:
TTAC_LOCUS330
M20_dimer domain-containing protein.
     
 0.945
TTAC_LOCUS8880
Uncharacterized protein.
     
 0.798
TTAC_LOCUS9132
Uncharacterized protein.
     
 0.798
TTAC_LOCUS4281
M20_dimer domain-containing protein.
     
 0.777
TTAC_LOCUS66
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
  0.768
TTAC_LOCUS9327
Uncharacterized protein.
     
 0.746
A0A158REF7
Uncharacterized protein.
      
 0.567
TTAC_LOCUS8360
SET domain-containing protein.
      
 0.554
TTAC_LOCUS6805
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.
      
 0.551
TTAC_LOCUS4458
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
   0.527
Your Current Organism:
Hydatigera taeniaeformis
NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis
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